Simple way of plotting normal/logistic/etc. curve

Reading time ~2 minutes

Plotting a function is often helpful to better understand what’s going on. Plotting curves in R base is simple by virtue of function curve. But how to draw curves using ggplot2?

That’s a little bit more complicated by can still be accomplished by 1-2 lines.

library(ggplot2)

Normal curve

p <- ggplot(data = data.frame(x = c(-3, 3)), aes(x))
  
p + stat_function(fun = dnorm, n = 101) 

plot of chunk unnamed-chunk-2

stat_function is some kind of parallel function to curve. The parameter n tells ggplot how finely granulated the curve should be. Compare to n=10:

p + stat_function(fun = dnorm, n = 10) 

plot of chunk unnamed-chunk-3

Logistic curve

The logitistic curve plays an eniment role in many statistical methods, e.g., regression for binary events, and Rasch model in psychometric. It is sometimes called “s-type” curve (or “ogive”) due to its form vaguely resembling an “S”:

scurve <- function(x){
  y <- exp(x) / (1 + exp(x))
  return(y)
}

p + stat_function(fun = scurve, n = 100) 

plot of chunk unnamed-chunk-4

As our function does not have a prebottled version in base R, we have defined a function beforehand. That function is then passed over to ggplot2.

Alternatively, we could have done that in one step:

p + stat_function(fun = function(x) exp(x)/(1+exp(x)), n = 100) 

plot of chunk unnamed-chunk-5

Which is shorter but somewhat less readable.

Ln-Function

Now the principle is clear and we can readily apply it to whatever function we wish. Let’s take the natural logarithm (log in R) as a final example.

p + stat_function(fun = log, n = 100)
## Warning in .Primitive("log")(x_trans): NaNs produced
## Warning: Removed 50 rows containing missing values (geom_path).

plot of chunk unnamed-chunk-6

Note that the ln-function is not defined for negative values (zero gives -Inf).

Wie gut schätzt eine Stichprobe die Grundgesamtheit?

# DatenSie arbeiten bei der Flughafenaufsicht von NYC. Cooler Job.```rlibrary(nycflights13)data(flights)```## Pakete laden```rlibrary(mos...… Continue reading

Some thoughts on tidyveal and environments in R

Published on November 16, 2017

Yart - Yet Another Markdown Report Template

Published on November 15, 2017