I kept wondering who to plot two R plots side by side (ie., in one “row”) in a .Rmd chunk. Here’s a way, well actually a number of ways, some good, some … not.
library(tidyverse)
library(gridExtra)
library(grid)
library(png)
library(downloader)
library(grDevices)
data(mtcars)
Plots from ggplot
Say, you have two plots from ggplot2
, and you would like them to put them next to each other, side by side (not underneath each other):
ggplot(mtcars) +
aes(x = hp, y = mpg) +
geom_point() -> p1
ggplot(mtcars) +
aes(x = factor(cyl), y = mpg) +
geom_boxplot() +
geom_smooth(aes(group = 1), se = FALSE) -> p2
grid.arrange(p1, p2, ncol = 2)
So, grid.arrange
is the key.
Plots from png-file
comb2pngs <- function(imgs, bottom_text = NULL){
img1 <- grid::rasterGrob(as.raster(readPNG(imgs[1])),
interpolate = FALSE)
img2 <- grid::rasterGrob(as.raster(readPNG(imgs[2])),
interpolate = FALSE)
grid.arrange(img1, img2, ncol = 2, bottom = bottom_text)
}
The code of this function was inspired by code from Ben from this SO post.
Now, let’s load two pngs and then call the function above.
png1_path <- "https://sebastiansauer.github.io/images/2016-08-30-03.png"
png2_path <- "https://sebastiansauer.github.io/images/2016-08-31-01.png"
png1_dest <- "https://sebastiansauer.github.io/images/2017-10-12/img1.png"
png2_dest <- "https://sebastiansauer.github.io/images/2017-10-12/img2.png"
#download(png1_path, destfile = png1_dest)
#download(png2_path, destfile = png2_dest)
comb2pngs(c(png1_dest, png2_dest))
This works, it produces two plots from png files side by side.
Two plots side-by-side the knitr way. Does not work.
But what about the standard knitr way?
knitr::include_graphics(c(png1_dest,png2_dest))
<img src=”“https://sebastiansauer.github.io/images/2017-10-12/img1.png” title=”plot of chunk unnamed-chunk-4” alt=”plot of chunk unnamed-chunk-4” width=”30%” style=”display: block; margin: auto;” /><img src=”“https://sebastiansauer.github.io/images/2017-10-12/img2.png” title=”plot of chunk unnamed-chunk-4” alt=”plot of chunk unnamed-chunk-4” width=”30%” style=”display: block; margin: auto;” />
Does not work.
Maybe with only one value for out.width?
?
knitr::include_graphics(c(png1_dest, png2_dest))
Nope. Does not work.
Does not work either, despite some saying so.
Maybe two times include_graphics
?
imgs <- c(png1_dest, png2_dest)
imgs
#> [1] "https://sebastiansauer.github.io/images/2017-10-12/img1.png"
#> [2] "https://sebastiansauer.github.io/images/2017-10-12/img2.png"
knitr::include_graphics(png1_dest); knitr::include_graphics(png2_dest)
An insight why include_graphics
fails
No avail. Looking at the html code in the md-file which is produced by the knitr -call shows one interesting point: all this version of include_graphics
produce the same code. And all have this style="display: block; margin: auto;"
part in it. That obviously created problems. I am unsure who to convince include_graphics
to divorce from this argument. I tried some versions of the chunk argument fig.show = hold
, but to no avail.
Plain markdown works
Try this code
![](https://sebastiansauer.github.io/images/2017-10-12/img1.png){ width=30% } ![](https://sebastiansauer.github.io/images/2017-10-12/img2.png){ width=40% }
The two commands ![]...
need not appear in one row. However, no new paragraph may separate them (no blank line between, otherwise the images will appear one below the other).
{ width=30% } { width=40% }
Works. But the markdown way does not give the fill comfort and power. So, that’s not quite perfect.
Conclusion
A partial solution is there; but it’s not optimal. There wil most probably be different alternatives. For example, using plain html or Latex. But it’s a kind of pity, the include_graphics
call does not work as expected (by me).